Package: pARI 1.1.3
pARI: Permutation-Based All-Resolutions Inference
Computes the All-Resolution Inference method in the permutation framework, i.e., simultaneous lower confidence bounds for the number of true discoveries. <doi:10.1002/sim.9725>.
Authors:
pARI_1.1.3.tar.gz
pARI_1.1.3.zip(r-4.7)pARI_1.1.3.zip(r-4.6)pARI_1.1.3.zip(r-4.5)
pARI_1.1.3.tgz(r-4.6-x86_64)pARI_1.1.3.tgz(r-4.6-arm64)pARI_1.1.3.tgz(r-4.5-x86_64)pARI_1.1.3.tgz(r-4.5-arm64)
pARI_1.1.3.tar.gz(r-4.7-arm64)pARI_1.1.3.tar.gz(r-4.7-x86_64)pARI_1.1.3.tar.gz(r-4.6-arm64)pARI_1.1.3.tar.gz(r-4.6-x86_64)
pARI_1.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
pARI/json (API)
NEWS
| # Install 'pARI' in R: |
| install.packages('pARI', repos = c('https://angeella.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/angeella/pari/issues
aricluster-mapcopesdiscoveriesfmrifslpermutationselective-inferencesimultaneous-confidence-boundsspmopenblascpp
Last updated from:e2d6b7db29. Checks:13 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 144 | ||
| linux-devel-x86_64 | OK | 131 | ||
| source / vignettes | OK | 270 | ||
| linux-release-arm64 | OK | 145 | ||
| linux-release-x86_64 | OK | 143 | ||
| macos-release-arm64 | OK | 196 | ||
| macos-release-x86_64 | OK | 311 | ||
| macos-oldrel-arm64 | OK | 188 | ||
| macos-oldrel-x86_64 | OK | 291 | ||
| windows-devel | OK | 214 | ||
| windows-release | OK | 141 | ||
| windows-oldrel | OK | 127 | ||
| wasm-release | OK | 133 |
Exports:criticalVectordIlambdaOptmap_TDPpARIpARIbrainpARIgenepermTestplotNullDistributionsignTestsimulateDatasimulateSpatialDataStatmap
Dependencies:ARIbrainhommelmatrixStatsplyrRcppRcppArmadilloRNifti
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Critical vector | criticalVector |
| Lower bound for the number of true discoveries | dI |
| Lambda calibration | lambdaOpt |
| True Discovery Proportion brain map | map_TDP |
| Permutation-based All-Resolutions Inference | pARI |
| Permutation-based All-Resolutions Inference for brain imaging. | pARIbrain |
| Permutation-based All-Resolutions Inference for Gene Expression Data | pARIgene |
| Permutation Test | permTest |
| Plot permutation p-values distribution | plotNullDistribution |
| Permutatation-based one-sample t-tests | signTest |
| simulate normal distributed data | simulateData |
| simulate normal distributed data | simulateSpatialData |
| Create Statistical Parametric Mapping (SPM) | Statmap |
